PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011070273.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

SRS

Protein Properties

Length: 366aa MW: 40422.3 Da PI: 8.149

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011070273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	24.4	8.4e-08	37	72	5	40
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvk 40 + +C CGn a+ C ++ C+ CC C+ hv XP_011070273.1 37 KPKCIKCGNVARSRCPYQSCKNCCAKAQNPCHIHVL 72 568*******************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence Send to blast
MAASSPAKSS AAAIDCATAG AIPSSSNASK SLRGLNKPKC IKCGNVARSR CPYQSCKNCC 60 AKAQNPCHIH VLKGNSSFPD KPPSSSSPLF DQQATDVSHS GNSHRLRQLS NNFAQFSNLQ 120 TPLRSRKPLT KKDAQVINEW RFLKLKGFKD GNVEAESEAF DRYMQNVALL EEVFLMNSAP 180 DDQIQEGPSF GVNSRSDGED TERIIHGLKL KLRSSSVRTD NFRKRIQYIV DQGLRKLGKP 240 ELIDGTGDLS DGEGQARPAK KTKSLPGDRA MAIRDVSDKL NKARNEEDLK GCWEMASEIF 300 RWDAKLSQTE PGEFLISREI NAKHDASTDQ ESSLFPPKWV SPATIDQEAF SRIDAQFSSL 360 EEIEDL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence Send to blast

MAASSPAKSS AAAIDCATAG AIPSSSNASK SLRGLNKPKC IKCGNVARSR CPYQSCKNCC  60
AKAQNPCHIH VLKGNSSFPD KPPSSSSPLF DQQATDVSHS GNSHRLRQLS NNFAQFSNLQ  120
TPLRSRKPLT KKDAQVINEW RFLKLKGFKD GNVEAESEAF DRYMQNVALL EEVFLMNSAP  180
DDQIQEGPSF GVNSRSDGED TERIIHGLKL KLRSSSVRTD NFRKRIQYIV DQGLRKLGKP  240
ELIDGTGDLS DGEGQARPAK KTKSLPGDRA MAIRDVSDKL NKARNEEDLK GCWEMASEIF  300
RWDAKLSQTE PGEFLISREI NAKHDASTDQ ESSLFPPKWV SPATIDQEAF SRIDAQFSSL  360
EEIEDL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011070273.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011070273.1	0.0	uncharacterized protein LOC105155972
TrEMBL	A0A2G9HC08	0.0	A0A2G9HC08_9LAMI; Uncharacterized protein
STRING	Migut.E00807.1.p	1e-163	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8544	11	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	3e-81