PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070329.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HD-ZIP
Protein Properties Length: 816aa    MW: 90506.5 Da    PI: 5.3959
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53e-2091146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_011070329.1  91 KKRYHRHTTRQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 146
                     688999***********************************************998 PP
2START146.42.6e-462915162206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     la + ++elvk+   +ep+Wv  +    + +n +e+ + f+ s +       +++ea r ++vv+m++ +lv  +ld + +W e ++    +a+t
  XP_011070329.1 291 LAVSSMDELVKMCHTAEPLWVPAAdtgkQVLNLEEYARMFSWSANlkqhspqFRTEATRHTAVVIMNSITLVDAFLDAN-KWMELFPciisRAKT 384
                     57789*******************88888888888888888777799999*****************************.*************** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                     l+v+ s       g l+lm+ae q+lsplvp R+  f+Ry++   ++g+w+ivd  +d   +    +s++  +++pSg++i++++ng+s+vtwve
  XP_011070329.1 385 LQVVHSEvsghanGSLHLMYAEVQVLSPLVPtREAHFLRYCQHnAEEGTWAIVDFPLDGLHNDY-PPSFAYYKRRPSGCIIQDMPNGYSRVTWVE 478
                     *******************************************9**************666555.45788888********************** PP

                     -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     h+++++  +h+++ slv+sg+a+ga++w+a lqrqce+
  XP_011070329.1 479 HAEVEDGPIHQVFSSLVSSGAAFGAQRWLAVLQRQCER 516
                     ************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-2078142IPR009057Homeodomain-like
SuperFamilySSF466891.34E-1980149IPR009057Homeodomain-like
PROSITE profilePS5007117.23288148IPR001356Homeobox domain
SMARTSM003891.6E-1889152IPR001356Homeobox domain
CDDcd000868.92E-1991149No hitNo description
PfamPF000461.1E-1791146IPR001356Homeobox domain
PROSITE patternPS000270123146IPR017970Homeobox, conserved site
PROSITE profilePS5084843.373281519IPR002913START domain
SuperFamilySSF559613.3E-32282518No hitNo description
CDDcd088755.70E-116285515No hitNo description
SMARTSM002343.7E-34290516IPR002913START domain
PfamPF018521.3E-38292516IPR002913START domain
SuperFamilySSF559615.82E-17534774No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048497Biological Processmaintenance of floral organ identity
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    Send to blast
MFGDCQVLSA MGGNGMPSDN ALYSTSMQHP NTTFMPAINP FNIFSPIIPK EEITGMAKSK  60
EELMESGSGS EHIEGFSGNE QEAEQQPQAK KKRYHRHTTR QIQEMEALFK ECPHPDDKQR  120
LKLSQELGLK PRQVKFWFQN RRTQMKAQQD RQDNVVLRAE NESLKNENYR LQATLRNIVC  180
PNCGGPAMMG EMGYDEQQLR IENARLKEEL ERMCCLVSQY TGRPMPGMGP PPLLPTSLDL  240
DVSSYPRKFE QDHMTNCPPD HMIPLPFMPE NSQFPGNALI LEEERPLALD LAVSSMDELV  300
KMCHTAEPLW VPAADTGKQV LNLEEYARMF SWSANLKQHS PQFRTEATRH TAVVIMNSIT  360
LVDAFLDANK WMELFPCIIS RAKTLQVVHS EVSGHANGSL HLMYAEVQVL SPLVPTREAH  420
FLRYCQHNAE EGTWAIVDFP LDGLHNDYPP SFAYYKRRPS GCIIQDMPNG YSRVTWVEHA  480
EVEDGPIHQV FSSLVSSGAA FGAQRWLAVL QRQCERLASL MARNISDLGV IPSPEARKSL  540
MNLAQRMTRT FCLNISTSYG QSWTALSDCA DDTVRITTRK VTEPGQPNGL ILSAVSTTWL  600
PYQHNQVFDF LRDERRRAQL EVLSNGNSLH EVAHIANGSH PGNCISLLRI NVASNSSQSV  660
ELVLQESCSD DSGSIVVYTT IDVDAIQMAM NGEDPSCIPL LPLGFVIVPM GQIANNDSGI  720
ADSKQASENG HLPDSGCLLT VGLQVLASTI PSAKLNLSSV TAINHHLCNT VQQINAVLGN  780
ISGNNFSENV DVLGSNIDPE PALPAENKPT DPCATS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070329.10.0homeobox-leucine zipper protein HDG5 isoform X2
SwissprotA2ZAI70.0ROC3_ORYSI; Homeobox-leucine zipper protein ROC3
TrEMBLA0A2G9HN190.0A0A2G9HN19_9LAMI; Transcription factor, contains HOX domain
STRINGMigut.E00753.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0homeobox-7