PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070399.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 255aa    MW: 28066.8 Da    PI: 9.2842
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.3e-2885144159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy WrKYGqK+  +++ pr+YY+C++a  Cpvkkkv+rs +dp++++ tYeg+H+h+
  XP_011070399.1  85 VKDGYGWRKYGQKVTGDNPSPRAYYKCSFApACPVKKKVQRSLNDPSLLVATYEGHHHHH 144
                     58***************************99***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2780146IPR003657WRKY domain
PROSITE profilePS5081125.44280146IPR003657WRKY domain
SuperFamilySSF1182901.96E-2481146IPR003657WRKY domain
SMARTSM007743.5E-2985145IPR003657WRKY domain
PfamPF031062.6E-2286144IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MVEELNRMKS ENKKLSDVLT IVTKNYNDLM QTRKRKAVDP GYYNHSCRYY SCCDETSAGT  60
LPKVIKSNVS RVYVRIDPSD TSLVVKDGYG WRKYGQKVTG DNPSPRAYYK CSFAPACPVK  120
KKVQRSLNDP SLLVATYEGH HHHHHPSQAN VSAVSPPGGA TGTSTTAARI TGERRGSTES  180
LDFLDPLICS KIQKAIAAIE SSEMQQFLVE KMASSLTRNP AFMAALAAAI TGRILDEVIS  240
EENKDVVSNS RGFSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-19841461374WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070399.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0491269e-46KJ049126.1 Sesamum indicum clone TilSSR_20327 microsatellite Sesame_20327 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070399.20.0probable WRKY transcription factor 40, partial
TrEMBLA0A022QPJ69e-93A0A022QPJ6_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01464.1.p1e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-61WRKY DNA-binding protein 40