PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070770.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 231aa    MW: 24343.7 Da    PI: 7.6706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.1e-0623621154
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +RRdr+++++++L+ell       + K + a+ L +A   I+sL
  XP_011070770.1 23 KRRDRLKEKLSTLKELLLDT----KSKFDQAALLDEAASRIRSL 62
                    7******************8....79****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.1751262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-41968IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-82382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.29E-72367No hitNo description
SuperFamilySSF474591.16E-92383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MEVDAGNTGP GPGEGDANLG LEKRRDRLKE KLSTLKELLL DTKSKFDQAA LLDEAASRIR  60
SLHSQLQALS SSMGRMHMPI AGYQGLSRTS ESGFVGHGIG IEPGMRFQVP YIPFQLHQMA  120
APFATCVVPS LLIPRLDSTL ISNPISGEPT TYQTLLSSTF LNPHPGITQH GVWEPSTNGT  180
LLRPTLGSLT DNGAGRGLGG AGTLFSGGVS KFPGCPATMP LSGTNLSPTY G
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070770.11e-167uncharacterized protein LOC105156356 isoform X3