PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070807.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 211aa    MW: 23790.7 Da    PI: 7.947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-1579127153
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     +++ GVr++  +g++ AeIrd +       kr++lg+f taeeA +a+   + ++
  XP_011070807.1  79 TKFVGVRRRN-WGKYSAEIRDpF-----AkKRVWLGTFSTAEEASRAYLSKKVEI 127
                     699****877.**********55.....35******************8777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.83E-2179120No hitNo description
PfamPF008472.3E-879123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-1980127IPR001471AP2/ERF domain
SMARTSM003801.5E-1380144IPR001471AP2/ERF domain
SuperFamilySSF541715.82E-1580127IPR016177DNA-binding domain
PROSITE profilePS5103216.92480138IPR001471AP2/ERF domain
PRINTSPR003671.3E-88192IPR001471AP2/ERF domain
PRINTSPR003671.3E-8103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MEDFSPDTRT IRVSYSDPDA TDSSSDESEE TRKKSKRKVH EIVLENANKK INFGCPDSDP  60
SPVELLMGCK KLRGPAARTK FVGVRRRNWG KYSAEIRDPF AKKRVWLGTF STAEEASRAY  120
LSKKVEIEEK LRAKQGFNWV PCETQDSPTS VLETETSETS NPESKKVKFG FFRGVQVVDR  180
NGFLMGEFSK LDDLSICTSD DDGLLPGHHK S
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070807.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070807.11e-155ethylene-responsive transcription factor ERF069
TrEMBLA0A2G9GIW97e-81A0A2G9GIW9_9LAMI; Uncharacterized protein
STRINGMigut.E00336.1.p2e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.16e-17ERF domain protein 11