PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070953.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 543aa    MW: 61097.9 Da    PI: 8.2341
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036480502123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp C+++F++   L  H r+H
  XP_011070953.1 480 HVCPFCNRVFKNGQALGGHKRSH 502
                     79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.23931IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.37E-7931No hitNo description
PROSITE profilePS501579.12936IPR007087Zinc finger, C2H2
PfamPF139122.6E-6931IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576671.37E-795122No hitNo description
SMARTSM003550.17100122IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.785100127IPR007087Zinc finger, C2H2
PfamPF139123.7E-7101124IPR007087Zinc finger, C2H2
PROSITE patternPS000280102122IPR007087Zinc finger, C2H2
SMARTSM003557.9398420IPR015880Zinc finger, C2H2-like
SuperFamilySSF576675.65E-6398420No hitNo description
PfamPF139125.1E-7398422IPR007087Zinc finger, C2H2
PROSITE profilePS501579.598398425IPR007087Zinc finger, C2H2
PROSITE patternPS000280400420IPR007087Zinc finger, C2H2
SuperFamilySSF576675.65E-6475502No hitNo description
SMARTSM003550.014480502IPR015880Zinc finger, C2H2-like
PfamPF139124.6E-8480502IPR007087Zinc finger, C2H2
PROSITE profilePS501579.245480502IPR007087Zinc finger, C2H2
PROSITE patternPS000280482502IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MEEDQELRFV CKLCNKKYPC GKSLGGHMRS HVLANSAESE EKVEANMKRV SSLGVAGQQS  60
VMNESKIAEF GNGQSSYGLR ENPRKSWRAV DSSFPLSQER VCKQCGKAFQ SLKALCGHMA  120
CHSERDRGLK DDHSWTSENQ KLVMDSHSDT EAEDRILRTR SSKSNKRYKK IVVKSPSFSL  180
ANNGSSSVSE IDGEEQEEVA MCLMLLSRDS GNKGGVNSVV ESSDNNSVIL ETKSSSIDMR  240
TKRREAPKEV DEIPQMKKIG DMMKLKDSVL EVAQADNSDS GYFLDECAKA ESDVSVDGFR  300
RNGAFGEYSK SLMNGSYEEY GAEFGHSLNR SKSYRAELKR ELVKENDYNT ASNSARIESR  360
RRRYISENPE LCNEYGRITR NEPPNAEACN ISQKKSKYEC FNCKKAFKSY QALGGHRPCH  420
KRNNAFYESR YESGENSLDD STEFVTTGKL VESASNRRSS AKNSSHYVEK KIKAKKNKGH  480
VCPFCNRVFK NGQALGGHKR SHFIGGHEEN NHRSPVVKPD MLDLNLPAPE EDEDDGRERF  540
SPW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070953.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070953.10.0zinc finger protein 91-like
TrEMBLA0A2G9HWQ10.0A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-178(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-73C2H2-like zinc finger protein