PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070956.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 323aa    MW: 34422.9 Da    PI: 5.6658
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1079.5e-34180237259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+
  XP_011070956.1 180 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCMVKKRVERSSEDPSVVITTYEGQHSHH 237
                     8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-34164238IPR003657WRKY domain
SuperFamilySSF1182906.02E-29171237IPR003657WRKY domain
PROSITE profilePS5081130.09174239IPR003657WRKY domain
SMARTSM007747.2E-40179238IPR003657WRKY domain
PfamPF031065.4E-27180237IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDGKRKADPE FIADSSWELG GEDVENLNHG YLFGSDYKES SILSEFGWNI PTESSGVCGC  60
DGGFVDLDPI ESGLPVSSAD GCVLAGTTAP RGDDTSRSLE PMVAVEENAT FASALASNPS  120
MSSSSSEDPA EKSTASGGSS AAAAANPPAD AASKAKKKGQ KRIRQPRFAF VTKSEIDHLE  180
DGYRWRKYGQ KAVKNSPFPR SYYRCTNSKC MVKKRVERSS EDPSVVITTY EGQHSHHSVG  240
FPRSGLVSQE AAFASPMAPS NSQFYYPRLQ TYPHENSLSI SQLPPSIQGK GGESGHKGQE  300
ASLQPSVGEG LLGDIVPPGM RNG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-261722361074Probable WRKY transcription factor 4
2lex_A3e-261722361074Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00067PBMTransfer from AT1G69310Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070956.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231671e-67KM823167.1 Salvia miltiorrhiza WRKY protein (WRKY44) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070956.10.0probable WRKY transcription factor 57 isoform X2
SwissprotQ9C9831e-66WRK57_ARATH; Probable WRKY transcription factor 57
TrEMBLA0A2G9HWQ21e-155A0A2G9HWQ2_9LAMI; Uncharacterized protein
STRINGMigut.E00056.1.p1e-95(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-55WRKY DNA-binding protein 57
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Jiang Y,Qiu Y,Hu Y,Yu D
    Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa.
    Front Plant Sci, 2016. 7: p. 145
    [PMID:26904091]
  3. Jiang Y,Yu D
    The WRKY57 Transcription Factor Affects the Expression of Jasmonate ZIM-Domain Genes Transcriptionally to Compromise Botrytis cinerea Resistance.
    Plant Physiol., 2016. 171(4): p. 2771-82
    [PMID:27268959]
  4. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]