PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011071046.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 261aa    MW: 28842.8 Da    PI: 5.9816
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011071046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.5e-11146193455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_011071046.1 146 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 193
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.02E-17140208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.49E-10140197No hitNo description
Gene3DG3DSA:4.10.280.109.8E-18142208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828142192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-8146193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10148198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDPQGTAMMN DGGGVYNFAE IWPGFQMNGN ATSYNLGLDP MVMDQRSNHS PPNHNSRKRR  60
DEDEHCAKGG GGASTSNSND CNNNNTVMSE VDGKRLKAVG SNENDENKVK EEGDSGKAAE  120
QPAKPTEPPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL  180
VLDEIINYIQ SLQRQVEFLS MKLETVNARG GIDGYPSKEF TQQTFETPGM AFGSQSTREY  240
DRGSSPEWLH MQIGGGFERT S
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011071046.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.10.0transcription factor bHLH79-like
SwissprotQ69WS32e-75BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2G9G2R31e-155A0A2G9G2R3_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p1e-147(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-84BIG PETAL P