PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011071373.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 372aa    MW: 41478.3 Da    PI: 6.6035
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011071373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.66.4e-34184242159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+vers+edp++v++tYeg+H+h+
  XP_011071373.1 184 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSTACGVKKRVERSSEDPSIVVTTYEGTHTHP 242
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.8E-35169244IPR003657WRKY domain
SuperFamilySSF1182901.44E-29176244IPR003657WRKY domain
PROSITE profilePS5081131.996179244IPR003657WRKY domain
SMARTSM007745.3E-40184243IPR003657WRKY domain
PfamPF031061.8E-27185242IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MAEKKTAATE NSLKNTAAAA ALAFPNQMMM IPENSFSNPN TLFDISCEQP HHQKTSSFGF  60
IDMLSVQDFT TPSSLFDDDF LQNITPNPSS FLPPPSSTVP EYSEVVNTPL TPNSSSMSTS  120
SSTDQPPPNE DHKKTTQTVE EEEEEQEQDQ QNTTKKQLKP KKKKEKRQRE PRFAFMTKSE  180
IDHLDDGYRW RKYGQKAVKN SPFPRSYYRC TSTACGVKKR VERSSEDPSI VVTTYEGTHT  240
HPCPITPRGS YGLMPAETAA RLGGGGIIGE GGGSTSTSHF VIPSHQMFQQ QLTPRTTIFQ  300
QQPYIFRNLI TPPPPPPLSF STTSTTTNPT FNPPAPSLFQ ERPFCPSTSL ARDHGLLQDM  360
LPSQMFKDPK EE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-261772441077Probable WRKY transcription factor 4
2lex_A2e-261772441077Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168KEKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011071373.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071373.10.0probable WRKY transcription factor 48
TrEMBLA0A2G9I0G11e-124A0A2G9I0G1_9LAMI; Uncharacterized protein
STRINGMigut.N00035.1.p2e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13092479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.14e-46WRKY DNA-binding protein 48