PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072025.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HB-other
Protein Properties Length: 125aa    MW: 14659.8 Da    PI: 9.2177
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.53e-10757656
                    S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +f+++ +e Le +F+++ ++++e++ eL + +gL+ +q++ WF  +Ra ++
  XP_011072025.1  7 RFSSSMIESLELAFKESEHLTKEKKIELVRVTGLDMEQITSWFNRKRACKR 57
                    6999***************************************99998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.8E-4162IPR001356Homeobox domain
CDDcd000861.16E-6659No hitNo description
PROSITE profilePS5007111.969659IPR001356Homeobox domain
PfamPF000461.0E-7757IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-11763IPR009057Homeodomain-like
SuperFamilySSF466891.67E-9761IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MIDSVSRFSS SMIESLELAF KESEHLTKEK KIELVRVTGL DMEQITSWFN RKRACKRSRE  60
SKGELEQINA ELKQSVHELH NRKAKLQMEF KESKRREAEL EAENELLKHR LKILGGDSVF  120
DSVIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072025.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022854043.18e-41uncharacterized protein LOC111375448
TrEMBLA0A2G9I6Z93e-41A0A2G9I6Z9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1565047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.14e-07homeobox 7