PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072197.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HB-other
Protein Properties Length: 160aa    MW: 19077.4 Da    PI: 6.0579
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox41.81.8e-13454656
                    S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +f+++q+e+L+++Fe++ ++++e++ eL + +gL+ +q+  WF  +Ra+++
  XP_011072197.1  4 RFEQHQIEALQSAFEESEHLTKEKKMELVAATGLDVEQIASWFSRKRARKR 54
                    69***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007113.75156IPR001356Homeobox domain
SMARTSM003892.3E-8260IPR001356Homeobox domain
SuperFamilySSF466898.55E-13365IPR009057Homeodomain-like
CDDcd000862.60E-9457No hitNo description
Gene3DG3DSA:1.10.10.601.9E-14462IPR009057Homeodomain-like
PfamPF000464.7E-11454IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MAKRFEQHQI EALQSAFEES EHLTKEKKME LVAATGLDVE QIASWFSRKR ARKRAKEVET  60
ELQLTHSRLQ QELRVCRWTE ADLHKELLES KKREANLNDE NRRLKERLAI AEGDKQFGSL  120
IRFFEDENRR FEERIAVAET DDHKQFGPSM RFVADDYPDW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072197.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072197.11e-113homeobox-leucine zipper protein ATHB-23-like
TrEMBLA0A2G9I7193e-47A0A2G9I719_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1565047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.19e-06homeobox 3