PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072844.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 189aa    MW: 22397.2 Da    PI: 5.4482
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.37e-28221561128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 
                     +p+G rF Ptdeel+v yL+kkv   +l++ +vi+e+d    y+  P+dL +++ ++e+ewyfF++ d+  + + +k r+++   gyWk+ gk++
  XP_011072844.1  22 MPVGWRFAPTDEELIVSYLTKKVFVGSLPA-RVIEEIDadeFYNKRPKDLVENL-SGEREWYFFINGDQYFHGKMEKDRKVAdgIGYWKSIGKEN 114
                     699********************9999888.66777654449999*****7554.6789********99888888888855424799******** PP

             NAM  91 evlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                     ++ +++g++   k   +++    +++++k ++t+W m+e+rl
  XP_011072844.1 115 PIRDAEGNAFAFKILYTYFsanpTQKNSKQKRTHWRMEEFRL 156
                     ****999999999888888777767888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.02E-3120178IPR003441NAC domain
PROSITE profilePS5100532.27222180IPR003441NAC domain
PfamPF023653.2E-1623156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MPFGDGILQE LPDAKDGILQ EMPVGWRFAP TDEELIVSYL TKKVFVGSLP ARVIEEIDAD  60
EFYNKRPKDL VENLSGEREW YFFINGDQYF HGKMEKDRKV ADGIGYWKSI GKENPIRDAE  120
GNAFAFKILY TYFSANPTQK NSKQKRTHWR MEEFRLLRRS TKNEENFHME EWVVARITRG  180
EDYNESRFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-182217715165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072844.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072844.11e-139NAC transcription factor 32
TrEMBLA0A2G9G8B66e-61A0A2G9G8B6_9LAMI; Uncharacterized protein
STRINGcassava4.1_022395m3e-42(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1616666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-26NAC domain containing protein 32