PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072952.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 299aa    MW: 32125.2 Da    PI: 6.3929
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.11.9e-383291362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++ lkcprCds ntkfCyynny+lsqPr+fCk+CrryWt+GG lrnvPvGgg+rk k+s+
  XP_011072952.1 32 HQPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGVLRNVPVGGGCRKTKRSK 91
                    6789****************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-292889IPR003851Zinc finger, Dof-type
PfamPF027016.2E-333389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6273589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MQDMHAVGGG GGGGRFLGGG DRRLRPHNHP THQPLKCPRC DSLNTKFCYY NNYNLSQPRH  60
FCKSCRRYWT RGGVLRNVPV GGGCRKTKRS KQKSSAASPG DASREMSLSS VQSSSSESSS  120
LTAAATATTT TATPTSAVPD EGSAPSNTSL SSAVAFDFPD GRFFSVMNRL ATDRNINHQP  180
LANHPSTDGQ IFQAEISSFT RLMTSSEEMM GFGMGEASTT SYGREQQANQ APTAKNPDPG  240
TAAVDEFKMQ DVSDEGLAAA LEWGSGGDEE LFDLTAGVDP AYWSQPQWTD NDQSINYLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11219GGRFLGGG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00570DAPTransfer from AT5G60850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072952.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072952.10.0dof zinc finger protein DOF5.4-like
TrEMBLA0A2G9GGV11e-112A0A2G9GGV1_9LAMI; Uncharacterized protein
STRINGMigut.K01260.1.p2e-85(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.19e-51OBF binding protein 4