PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073111.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 238aa    MW: 26930.1 Da    PI: 9.5269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1287.4e-40141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevls 94 
                     lppGfrF+Ptdee+v +yL++k+ + +l++ +vi+e+++++++Pw+Lp    +++++ yfFs+ r+++y++ +r++r+t  gyWk tg+dk++++
  XP_011073111.1  14 LPPGFRFQPTDEEIVFQYLARKTFSYPLPA-SVIPEINVFSFHPWELPG---NSDQDRYFFSHlRESSYRSVNRSSRTTCGGYWKITGSDKQIVC 104
                     79****************************.99***************3...45677787765267788899*********************99 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   vg+k+tLvfykg++p++++tdW+mh y +
  XP_011073111.1 105 LkRMPIVGIKRTLVFYKGKHPRAVRTDWFMHLYCI 139
                     635556*************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-4710173IPR003441NAC domain
PROSITE profilePS5100546.96314173IPR003441NAC domain
PfamPF023653.7E-2015138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDKFNFVRDG ESKLPPGFRF QPTDEEIVFQ YLARKTFSYP LPASVIPEIN VFSFHPWELP  60
GNSDQDRYFF SHLRESSYRS VNRSSRTTCG GYWKITGSDK QIVCLKRMPI VGIKRTLVFY  120
KGKHPRAVRT DWFMHLYCIA LSGNVACNIQ QKRSSQGSSV QIGKWVLCHV FTKKRGTKAE  180
VDSNSRRRNY DFMITGETSD TDSSSASSSS YSCDSDSSAV SEVSSNTANS ETNSGRNV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-3781747169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073111.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073111.11e-179NAC domain-containing protein 83
TrEMBLA0A2G9GSQ51e-111A0A2G9GSQ5_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000110694e-82(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-56NAC domain containing protein 83