PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073138.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TALE
Protein Properties Length: 603aa    MW: 67128.4 Da    PI: 6.6532
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.17.3e-093694061954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  XP_011073138.1 369 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 406
                     554458******************************88 PP
2BELL110.59.4e-36233301472
            BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     elqk+k+kLl++l+eVd+rYk+y++q+++v+ sFe vag gsa++Y ++A++a+SrhF+cLkd i +qi
  XP_011073138.1 233 ELQKRKTKLLQMLDEVDRRYKHYRDQMKAVVQSFESVAGNGSAQVYSAMASRAMSRHFKCLKDGILSQI 301
                     89*****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005748.4E-51171299IPR006563POX domain
PfamPF075265.0E-42178297IPR006563POX domain
PROSITE profilePS5007112.115347410IPR001356Homeobox domain
SMARTSM003891.2E-8350414IPR001356Homeobox domain
CDDcd000867.23E-12350411No hitNo description
SuperFamilySSF466894.71E-17351416IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-27353416IPR009057Homeodomain-like
PfamPF059207.9E-18367406IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 603 aa     Download sequence    Send to blast
MYCMAGAGGV TSTGYCYSDD ASSTGNPNIQ THLLSQLQSF ESNPDIYNLT TSMGMIGFPS  60
KNSVLISPQS ENTSVYHQDS TNGTLMVNSS AWNHHHHHHM NRLLLVEDHD HQDPSLRCAV  120
LGDHHHHERP SHGLSLSLSS SNNLGLQSFA LRLNDDFRFG PSSSRSVNTA TTAQFQPRNS  180
KYLGPAQELL TEFCNLGSDK TSKLKVQKCS GLEDDESDDV KKQSFYSSFD LLELQKRKTK  240
LLQMLDEVDR RYKHYRDQMK AVVQSFESVA GNGSAQVYSA MASRAMSRHF KCLKDGILSQ  300
IKAIKKAMGE KDSAAPGTTK GETPRLRILD QTLRQQRAFQ QMSMIENPPW RPQRGLPERS  360
VSVLRSWLFE HFLHPYPSDV DKHILARQTG LSRSQVSNWF INARVRLWKP MVEEMYLEDL  420
KEGEDMGELD GAANHHENGN QNPPPGNDDQ KPTQDQLIRI DSDYLSSIIN NPGKNDPKAP  480
DKSLGSDHHH HHQESSFSRV GEEYGTSMQF DFSSYSQQAG GATVSYGGGS GVSLTLGLQQ  540
NGASGGVSLA FSPATQSSLF YPRSSDNMED CQTVHQYSLL DSENQNLPYR NLMGAQLLHD  600
LAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-15356414563Homeobox protein Meis2
4xrm_B2e-15356414563Homeobox protein Meis2
4xrs_A2e-15356413158Homeobox protein Meis1
4xrs_B2e-15356413158Homeobox protein Meis1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073138.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0774174e-56KJ077417.1 Sesamum indicum clone TilSSR_48618 microsatellite Sesame_48618 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073138.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-129BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2I4H8R60.0A0A2I4H8R6_JUGRE; homeobox protein BEL1 homolog
STRINGEOY248260.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53001317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-118TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]