PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073675.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 196aa    MW: 22582.5 Da    PI: 11.6533
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-1081124548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++ rr+++NRe+ArrsR RK++ +e+L++    L + N +L ++
  XP_011073675.1  81 RKRRRMISNRESARRSRMRKQKHLENLRTQLNRLRTVNGELTNR 124
                     5789**********************************999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-1077141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.05979142IPR004827Basic-leucine zipper domain
PfamPF001702.8E-781125IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-981153No hitNo description
SuperFamilySSF579591.41E-1081130No hitNo description
CDDcd147025.35E-1982131No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MLSTSPAVLF SDSSQFPPFA GGFPPWVSHE PPFLFHPPLQ DQEPVSSNNS GSETSKPPPA  60
IPNSSSDEPN PKPLGSIIDE RKRRRMISNR ESARRSRMRK QKHLENLRTQ LNRLRTVNGE  120
LTNRVRWVVH QDQLVRRQNE HLRSEAVVLR QRLWDIRQVL LVRQLHQQLN PSPAWPCNNF  180
TSTNEGQLIT HQSLIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18084RKRRR
280101RKRRRMISNRESARRSRMRKQK
393100RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073675.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073675.11e-140basic leucine zipper 4
TrEMBLA0A2G9FVP98e-63A0A2G9FVP9_9LAMI; Uncharacterized protein
STRINGMigut.H00326.1.p5e-57(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.13e-25basic leucine-zipper 5