PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073967.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 149aa    MW: 16429.9 Da    PI: 8.6947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.0001139731554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++ ++++ L++l+ +      +K + a++L +++eYI+ L
  XP_011073967.1 39 KVSERISALQQLVSPY-----GKTDTASVLLEVMEYISFL 73
                    78899********999.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.31E-52278No hitNo description
PROSITE profilePS5088810.9562473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-72582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-102785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MMQHKRSPVS LEQSNFMDLM PKRVKRTGVP LSSKEKKEKV SERISALQQL VSPYGKTDTA  60
SVLLEVMEYI SFLHEQVKVL SAPYLCSTPT QSQDDETYSL RAKGLCLVPI SFTVGVASSN  120
GADIWAPIKT SLPNSRQLVV DEASVITQG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073967.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073967.11e-107transcription factor bHLH113 isoform X1
SwissprotQ7XJU14e-52BH154_ARATH; Transcription factor bHLH154
TrEMBLA0A2G9GQ111e-82A0A2G9GQ11_9LAMI; Uncharacterized protein
STRINGMigut.N03067.1.p3e-76(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.11e-47bHLH family protein