PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074130.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 585aa    MW: 65632.7 Da    PI: 4.4901
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1683.3e-52151412128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppGfrFhPtdeelv +yLk+k+ ++++++ +vi e+d+yk++P+dLp  +k+k+++++w+fFs+rd+ky++g r+nrat +gyWkatgkd+ + +
  XP_011074130.1  15 PPGFRFHPTDEELVLYYLKRKICRRRHRM-DVIGETDVYKWDPEDLPgmSKLKTGDRQWFFFSPRDRKYPNGARSNRATGHGYWKATGKDRVISC 108
                     9*************************999.99***************64489999***************************************9 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ vg+kktLvfy+grap+ge+tdWvmhey++
  XP_011074130.1 109 -GSHPVGIKKTLVFYRGRAPSGERTDWVMHEYTM 141
                     .9******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-5913164IPR003441NAC domain
PROSITE profilePS5100555.31814164IPR003441NAC domain
PfamPF023655.1E-2715140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MKVNSGCLGD GKIFPPGFRF HPTDEELVLY YLKRKICRRR HRMDVIGETD VYKWDPEDLP  60
GMSKLKTGDR QWFFFSPRDR KYPNGARSNR ATGHGYWKAT GKDRVISCGS HPVGIKKTLV  120
FYRGRAPSGE RTDWVMHEYT MVEEELKRCQ TAVEYYALYK VYKKSGPGPK NGEQYGAPFR  180
EEDWADDEIE VQCLIEQENS VKQASETSPI NNTETVNCQH TSSLDDFEDI MNQIADEPIP  240
VQPIVVDYGY VLDHFTGEEE TQSVDHTSRD VSLRMLQPCS QLQNVPGNLD VTQSGTSQLQ  300
FSEAPEVSSA PTINVQDPCV LEEDFLEDFL EMNDLIDQEP TTQNPNEPGS NLENLQFDDF  360
DGLNVVDLFQ DSSLFISEVG AGESWEMSQS YLRSFDNGVM NPDSSLYSNN LENTRVIYQL  420
EQQFNIANRT SCQLRTEEES YSAIAAEANQ DRIPSSTSGV VHQSQNHDFV NHATGANEIG  480
SSKQDDGTDS WFSSALWSFV ESIPTTPASA SETALVNKAF KRMPSFSSVR VNARNTNVVA  540
GNTSATSRSS GKSRSGFLCF SLVGVICAIL WMLMGTSVRV MGLYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-501416420168NAC domain-containing protein 19
3swm_B4e-501416420168NAC domain-containing protein 19
3swm_C4e-501416420168NAC domain-containing protein 19
3swm_D4e-501416420168NAC domain-containing protein 19
3swp_A4e-501416420168NAC domain-containing protein 19
3swp_B4e-501416420168NAC domain-containing protein 19
3swp_C4e-501416420168NAC domain-containing protein 19
3swp_D4e-501416420168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074130.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074130.10.0NAC domain-containing protein 17-like
TrEMBLA0A2G9I6C60.0A0A2G9I6C6_9LAMI; Uncharacterized protein
STRINGMigut.N02933.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-122NAC domain containing protein 17