PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074364.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 247aa    MW: 26052.2 Da    PI: 8.6799
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.001392114123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F +   L  H  +H
  XP_011074364.1  92 YKCSVCDKAFGSYQALGGHKASH 114
                     9*********9999998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.5E-1391116IPR007087Zinc finger, C2H2
SuperFamilySSF576671.62E-991114No hitNo description
SMARTSM003550.01892114IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.9192119IPR007087Zinc finger, C2H2
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
SuperFamilySSF576671.62E-9142169No hitNo description
PfamPF139124.2E-11146171IPR007087Zinc finger, C2H2
SMARTSM003551.8147169IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.224147175IPR007087Zinc finger, C2H2
PROSITE patternPS000280149169IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010117Biological Processphotoprotection
GO:0010200Biological Processresponse to chitin
GO:0015979Biological Processphotosynthesis
GO:0035264Biological Processmulticellular organism growth
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MALEALNSPT APPPSFKFDA ATYFEPWTKG KRTKRPRSLG RLHDDAPSEE EYLALCLVML  60
ARGGAPPLHP KQSQPQPRIP MVASADPSKL VYKCSVCDKA FGSYQALGGH KASHRKLSSG  120
DDNPTSTSTS TATTSTVATG GSGGRTHECS ICHKCFPTGQ ALGGHKRCHY EGGAPSSKGA  180
GAGSSVAATT TSSEGVGSTV THRDFDLNLP ALPEFWRGFS SGVEDEVESP HPAKKSRLSL  240
PAKLEIF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00162DAPTransfer from AT1G27730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074364.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074364.10.0zinc finger protein ZAT10-like
TrEMBLA0A2G9H4F91e-101A0A2G9H4F9_9LAMI; Uncharacterized protein
STRINGXP_009621070.14e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7352495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-51salt tolerance zinc finger