PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011074497.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

NAC

Protein Properties

Length: 384aa MW: 42442 Da PI: 6.2486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011074497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51.7	3e-16	19	118	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105 de+++ L g++l+ +v+++ y++ P++Lp e wy ++++kk+ +g+Wka+g++ +++s +++ +g ++t XP_011074497.1 19 DEQII-SLLDGYKPGSSLPN-NVLADSSPYQYPPSNLP------EGIWYLLHSNEKKE---------CVDGFWKAKGESCKIYS-NSKITGWRTT 95 55555.66666666677776.77888899999999998......23578777776654.........568************.999*** PP NAM 106 LvfykgrapkgektdWvmheyrl 128 L +++g+ap+g+kt+W m+eyr+ XP_011074497.1 96 LEYFEGQAPHGQKTNWHMQEYRI 118 *******************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	23.251	9	141	IPR003441	NAC domain
SuperFamily	SSF101941	3.79E-23	16	139	IPR003441	NAC domain
Pfam	PF02365	1.6E-7	45	118	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MCPPPQTPPP AEIGSNWSDE QIISLLDGYK PGSSLPNNVL ADSSPYQYPP SNLPEGIWYL 60 LHSNEKKECV DGFWKAKGES CKIYSNSKIT GWRTTLEYFE GQAPHGQKTN WHMQEYRITQ 120 KELCDKDKPK ESRSLCRVFL CSGHKGEMHS QNCITVVGST KVNSVTLINP EDNITSHQDS 180 KRDSKEKRGH EAAVLPVVAD TRPNSSPQGL SELDYILRGD YLELDDLEDP ESHSSSSQNS 240 SCPSKLSDEY FDSSAFLRDL EEEVNSFVPR SQCSSRYSFT ASLSANDVIL QPVSLGSVSS 300 ASIRSNVVEG PVTSSTIPES LADKRVQEHT TKRQNPESRN EGASNFSSLG SPSTSNKSTA 360 RSGEKKAGAG RMKKLKTYFC FSTF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MCPPPQTPPP AEIGSNWSDE QIISLLDGYK PGSSLPNNVL ADSSPYQYPP SNLPEGIWYL  60
LHSNEKKECV DGFWKAKGES CKIYSNSKIT GWRTTLEYFE GQAPHGQKTN WHMQEYRITQ  120
KELCDKDKPK ESRSLCRVFL CSGHKGEMHS QNCITVVGST KVNSVTLINP EDNITSHQDS  180
KRDSKEKRGH EAAVLPVVAD TRPNSSPQGL SELDYILRGD YLELDDLEDP ESHSSSSQNS  240
SCPSKLSDEY FDSSAFLRDL EEEVNSFVPR SQCSSRYSFT ASLSANDVIL QPVSLGSVSS  300
ASIRSNVVEG PVTSSTIPES LADKRVQEHT TKRQNPESRN EGASNFSSLG SPSTSNKSTA  360
RSGEKKAGAG RMKKLKTYFC FSTF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011074497.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074497.1	0.0	NAC transcription factor 29-like isoform X3
TrEMBL	A0A2G9H4L9	1e-121	A0A2G9H4L9_9LAMI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	8e-16	NAC domain containing protein 28