PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074761.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Trihelix
Protein Properties Length: 528aa    MW: 59253.2 Da    PI: 7.114
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.49.2e-145543687
        trihelix 36 kkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                     km+e gf+rs+k+Ckek+en+ k++k++k+g+ ++   + +t+++fdqlea
  XP_011074761.1  5 WKMAELGFQRSAKKCKEKFENVYKYHKRTKDGRASK--SDGKTYRFFDQLEA 54
                    58********************************97..45567*******85 PP
2trihelix105.24.8e-33346431187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k ev+aLi++r++++ +++++  k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  XP_011074761.1 346 RWPKAEVQALINLRTSLDLKYQENGPKGPLWEEISAGMAKLGYNRSSKRCKEKWENINKYFKKVKESNKKR-AEDSKTCPYFHQLDA 431
                     8*********************************************************************8.89999********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.7E-8655No hitNo description
SMARTSM007173.8E-4343405IPR001005SANT/Myb domain
PROSITE profilePS500907.445345403IPR017877Myb-like domain
PfamPF138372.1E-23345432No hitNo description
Gene3DG3DSA:1.10.10.603.9E-4345402IPR009057Homeodomain-like
CDDcd122038.60E-30345410No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MTKSWKMAEL GFQRSAKKCK EKFENVYKYH KRTKDGRASK SDGKTYRFFD QLEALENAPP  60
PPFTPPPPRP QPPPSTAAPP MPTNATNLPM PSHITVSSTS PNPVSVAPPA QTANNPINAS  120
ALFHPSQLPQ LQPPPPAAVN ASNPPQTQPF QTSHPHMSLM SNSTSTSSTS SDEDIQRRRG  180
RKRKWKDFFQ RLMKDVIHKQ EELQKKFLDT LEKRERERMA REEAWRVQEM SRMNREHELL  240
VQERSIAAAK DAAVIAFLQK VTEQHNLQVP IGNSTTAPPP MQVQPPENPQ PPWQPPPPPP  300
PQPQQSTVPP PPAAPGPIVT VTPTKAIETS KTDNGGDTCV SASSSRWPKA EVQALINLRT  360
SLDLKYQENG PKGPLWEEIS AGMAKLGYNR SSKRCKEKWE NINKYFKKVK ESNKKRAEDS  420
KTCPYFHQLD AIYKEKAKND VVGSFNPMKP ENAMVPIMAR PEQQWPLGEQ QQQDSAMPDQ  480
DDHDNDSYNN NDHEEDDDGD EEDEDDEGGS YEIVTNKQPS SATNTTAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177183RRGRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074761.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074760.10.0trihelix transcription factor GT-2-like
TrEMBLA0A2G9GE440.0A0A2G9GE44_9LAMI; Transcription factor GT-2
STRINGXP_009618661.11e-171(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.16e-58Trihelix family protein