PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075032.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 231aa    MW: 25430.7 Da    PI: 4.6179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.4e-12167212655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +Av Y+k Lq
  XP_011075032.1 167 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVAYVKFLQ 212
                     689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.583161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-16164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.70E-12165216No hitNo description
Gene3DG3DSA:4.10.280.104.5E-16166223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-9167212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-13167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MIVVVNVCLV EAATWLEALL ESDDDQSEVV LDIPKPPPSA APSDLDLDFL EPTSAAGLTN  60
FLRQNSSPAE FLSLLNDSDG YFSNLGIPAT YDYVSSSSPK RAREAEDLDK LSPKLSSSSS  120
TPLKGEKDGQ LQGGIGGSLD AEMEKLLGDS VMCRVRAKRG CATHPRSIAE RVRRTRISDR  180
IRKLQELVPN MDKQTNTADM LDEAVAYVKF LQKQIQELTE HQRNCKCIMN D
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075032.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075032.11e-170transcription factor bHLH80
SwissprotQ9C8P88e-68BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A2G9GUA71e-106A0A2G9GUA7_9LAMI; Uncharacterized protein
STRINGMigut.N03367.1.p6e-96(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117871923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.11e-57bHLH family protein