PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075633.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ZF-HD
Protein Properties Length: 170aa    MW: 19377.8 Da    PI: 10.5496
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer254.5e-086184557
     ZF-HD_dimer 45 ACgCHRnFHRrev 57
                    ACgCHRnFHRr+ 
  XP_011075633.1  6 ACGCHRNFHRRDL 18
                    9**********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047707.2E-5517IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466896.17E-1970144IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.9E-2970144IPR009057Homeodomain-like
TIGRFAMsTIGR015659.9E-2583139IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MGMLKACGCH RNFHRRDLPD YPPTPSFLAF RNPKRSSLSP SPPPPPPPFQ HRPYQLFTLS  60
TEAAAEDHHQ DPETPKAEHP VGRKRSRTKF SQEQKEKMHS FSEKVGWKLH KSDEAAVEEF  120
CRQVGVAKGV LRVWMHNNKT TFGRKATKIS SSSSSRNEES RKTDNRSGVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A6e-20841411875ZF-HD homeobox family protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075633.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0533252e-58KJ053325.1 Sesamum indicum clone TilSSR_24526 microsatellite Sesame_24526 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075633.11e-124zinc-finger homeodomain protein 10-like
TrEMBLA0A2G9HHY81e-47A0A2G9HHY8_9LAMI; Uncharacterized protein
STRINGMigut.L01294.1.p6e-48(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.11e-29homeobox protein 34