PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075657.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 187aa    MW: 21888.7 Da    PI: 4.8526
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.83.7e-35141412127
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     p GfrFhPtd el+ +yL +k++g++l+ +e+i ++ ++y+++P +Lp  ++k+ +eke yfF+ ++ k++ g+ + r+t +gyWka  +d +++
  XP_011075657.1  14 PLGFRFHPTDVELLLYYLLPKLKGEDLSSSEFIMDFlGVYQHDPDRLPlDQFKHgREKEAYFFTLEEIKNSVGEGPVRTTPTGYWKAYREDVPIH 108
                     89************************99999977766***********755555266799*********************************** PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyr 127
                     + ++e +g k+ L fy+++ p+g++tdW m ey 
  XP_011075657.1 109 H-NQEIIGFKNKLLFYRENVPNGTQTDWKMTEYF 141
                     *.999****************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-389166IPR003441NAC domain
PROSITE profilePS5100536.21513166IPR003441NAC domain
PfamPF023651.0E-1714140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MDFIQRLLSD ADFPLGFRFH PTDVELLLYY LLPKLKGEDL SSSEFIMDFL GVYQHDPDRL  60
PLDQFKHGRE KEAYFFTLEE IKNSVGEGPV RTTPTGYWKA YREDVPIHHN QEIIGFKNKL  120
LFYRENVPNG TQTDWKMTEY FCSPSWIATT STSTVGRYVV CKVRQKMRAE EDEPLLEEEN  180
GFIEGSK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-22817112170NO APICAL MERISTEM PROTEIN
1ut4_B3e-22817112170NO APICAL MERISTEM PROTEIN
1ut7_A3e-22817112170NO APICAL MERISTEM PROTEIN
1ut7_B3e-22817112170NO APICAL MERISTEM PROTEIN
3swm_A3e-22817115173NAC domain-containing protein 19
3swm_B3e-22817115173NAC domain-containing protein 19
3swm_C3e-22817115173NAC domain-containing protein 19
3swm_D3e-22817115173NAC domain-containing protein 19
3swp_A3e-22817115173NAC domain-containing protein 19
3swp_B3e-22817115173NAC domain-containing protein 19
3swp_C3e-22817115173NAC domain-containing protein 19
3swp_D3e-22817115173NAC domain-containing protein 19
4dul_A3e-22817112170NAC domain-containing protein 19
4dul_B3e-22817112170NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075657.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075657.11e-139NAC transcription factor 29-like
TrEMBLA0A2G9H1T94e-44A0A2G9H1T9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1513268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-22NAC domain containing protein 36