PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076239.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 193aa    MW: 20864.9 Da    PI: 4.6169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.56.1e-173382155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  XP_011076239.1 33 PVYRGIR-CR-SGKWVSEIREPRK---TTRVWLGTYPTPEMAAAAYDVAALALKG 82
                    68****9.55.6*********843...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-103382IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-263490IPR001471AP2/ERF domain
PROSITE profilePS5103220.1523490IPR001471AP2/ERF domain
SMARTSM003802.8E-273496IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-183490IPR016177DNA-binding domain
CDDcd000185.01E-163590No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MATEDVSTNH DTSDQQYSSP PPAIASPTSR RHPVYRGIRC RSGKWVSEIR EPRKTTRVWL  60
GTYPTPEMAA AAYDVAALAL KGPDALINFP GLASSYPLPA SHSAGDIHAA AXLAPRSGGD  120
QIQFQPPGNE ASSSAQTPGN EFVDEEALFD MPKLLVDMAE GMLVSPPRLM KSGAEDEESP  180
ENYSRNDSLW SYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076239.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076239.21e-139LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF025
SwissprotQ9FJ902e-56ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A2G9I9Z71e-84A0A2G9I9Z7_9LAMI; Uncharacterized protein
STRINGMigut.F00381.1.p8e-67(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-57ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]