PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076269.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 256aa    MW: 28738.5 Da    PI: 6.1574
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.3e-1270122155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++   ++ +r+llP       ++K   ++ L +Av+YIk++q
  XP_011076269.1  70 KKIMHRDVERQRRQEMSGLYASIRSLLPLeY---VKGKRAISDHLDQAVNYIKHMQ 122
                     5789*************************77...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-1466136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.46E-1067126No hitNo description
PROSITE profilePS5088812.7669121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-971122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1071137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-475127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MFPLQSNLIV FEDVPLFLDQ DKILEDLLAD CAVLEGNENT ADQGVKKRQR KASSAAGIQE  60
NKDESSNETK KIMHRDVERQ RRQEMSGLYA SIRSLLPLEY VKGKRAISDH LDQAVNYIKH  120
MQKKLEEMKM RRDKLKNLSN SSAPNVDAED RGSSTTTSSN CLKVKLCWDG VEILICSSLD  180
EGDFPLSKVL ADLLGRGLDV ISCISTRVDG QSLHKIQLQV NDPTSIDLSK LQDRLSDVIE  240
QAQSARGRSR YQESSN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076269.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076269.10.0transcription factor bHLH36-like
TrEMBLA0A2G9G1L61e-89A0A2G9G1L6_9LAMI; Uncharacterized protein
STRINGMigut.F01201.1.p3e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-40bHLH family protein