PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076271.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 139aa    MW: 15650.7 Da    PI: 10.1336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.8e-11961155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++ +h   Er+RR+++   ++ +r+llP+     +++K   ++ + +Av+Y+k++q
  XP_011076271.1  9 KKIMHRDTERQRRQEMSGLYASIRSLLPQeY---TKGKRCASDHVGQAVNYVKHMQ 61
                    5789*************************77...9999999**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-13776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.249860IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-8961IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.56E-7965No hitNo description
Gene3DG3DSA:4.10.280.102.2E-7958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-45977IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MDEGSTHTKK IMHRDTERQR RQEMSGLYAS IRSLLPQEYT KGKRCASDHV GQAVNYVKHM  60
QKKIEEMKMR RDKLKRLSNS SGPANTYAED QNSDMMSGSS NCVTVNGFHG AVEILMSSSF  120
NQGDFPLSKA IAHLLGRGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16875MRRDKLKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076271.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076271.11e-101transcription factor bHLH36 isoform X3
SwissprotQ9FLI13e-29BH036_ARATH; Transcription factor bHLH36
TrEMBLA0A2G9G1L66e-44A0A2G9G1L6_9LAMI; Uncharacterized protein
STRINGXP_004300739.13e-35(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-31bHLH family protein