PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076435.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 229aa    MW: 25278.3 Da    PI: 4.9967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-18141191255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp     r   r++lg+++ta +Aa+a++ a+ k++g
  XP_011076435.1 141 RYRGVRRRP-WGKYAAEIRDPI----RkgSRVWLGTYDTAVDAARAYDCAAFKMRG 191
                     7********.**********72....235*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.68E-23141201IPR016177DNA-binding domain
PfamPF008477.6E-13141191IPR001471AP2/ERF domain
PROSITE profilePS5103224.592141199IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-32141200IPR001471AP2/ERF domain
SMARTSM003804.2E-36141205IPR001471AP2/ERF domain
PRINTSPR003672.5E-13142153IPR001471AP2/ERF domain
CDDcd000184.90E-25149199No hitNo description
PRINTSPR003672.5E-13181201IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MATPDECLTL DLIRQHLLED FTSAESFLDN LNLHFPDVFA DTSVGRSGEI GSPSSGSESC  60
SDPKQSHDLP VSGYLDLQPD FFEVEMKPQI SMNCSSSDNY DDPGPDDTPP ALPPPIEKPV  120
KSDLQCEMAF GSEPIARLGR RYRGVRRRPW GKYAAEIRDP IRKGSRVWLG TYDTAVDAAR  180
AYDCAAFKMR GSKAILNFPM DAGKYGPPAS AGRRRRRVKM SEDCADPSP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-27139200364ATERF1
3gcc_A1e-27139200364ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076435.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076435.11e-169ethylene-responsive transcription factor ERF106-like
TrEMBLA0A022PWJ92e-84A0A022PWJ9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F00526.1.p3e-85(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-22ERF family protein