PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076504.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 245aa    MW: 27354.8 Da    PI: 5.0596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-066896129
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk 29
                    ++ +h  +Er+RR+++   ++ +r+llP 
  XP_011076504.1 68 KKIMHRDIERQRRQEMSGLYASIRSLLPL 96
                    5789************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-1066124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.43267118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-568112No hitNo description
Gene3DG3DSA:4.10.280.105.2E-669129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MFPLQSNALV FDDIHEFLEQ DNVLEDLLAD CAALEGNEHT ADQAGVKKSA SSAGGVQENK  60
EESSSEIKKI MHRDIERQRR QEMSGLYASI RSLLPLEYIK AVNYIKHMQK KIDEMKMRRD  120
KLKRLSNSLG PSSDADQERN SDTSGSSNCV SVNVDVCQGG VEILISSSLN EGNFPLSKVL  180
EDLLRRELNV LSCVSTRADG QSVHKIQIEV NNMYTASLQF SQVNDLRSID LAELRDRLAN  240
VIKLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116123MRRDKLKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076504.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076269.11e-107transcription factor bHLH36-like
TrEMBLA0A2G9G1L61e-72A0A2G9G1L6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-28bHLH family protein