PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076580.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 316aa    MW: 35596.6 Da    PI: 5.1289
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.12e-24122182159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK++ +se+pr YYrCt++  gC+++k+v+r +edp + ++tY ++H+++
  XP_011076580.1 122 MEDGCAWRKYGQKVILNSEYPRCYYRCTHKyeGCKATKQVQRIKEDPVMYQTTYFSNHTCK 182
                     58***************************999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-25114183IPR003657WRKY domain
PROSITE profilePS5081120.277117179IPR003657WRKY domain
SuperFamilySSF1182903.4E-24119182IPR003657WRKY domain
SMARTSM007741.0E-33122183IPR003657WRKY domain
PfamPF031069.8E-24123182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MGCLDTETLH AESWKRLMVV ELLKGRDTAT RLRALLQDPR SHQDPVSAEQ LAVEIFRSFS  60
ESLSVLSSRV DVVGSAQIPA VDSGGSSSCS GESKKKPGVK DRRGCYKRRR TSDSRVTVSS  120
TMEDGCAWRK YGQKVILNSE YPRCYYRCTH KYEGCKATKQ VQRIKEDPVM YQTTYFSNHT  180
CKETPRAPHL IIDSDPVEPN LISFQAPKAQ DHTPTNLVKQ ELYKEDNLSE DQDQDQDLSD  240
DQAKSSLLQD PWQEFMGLES SGYKPVWTTM ITSSSYQEEV ASAGFHHSSD DQTAGLYGLD  300
LEVDQLGDID NIFPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-18117182369OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193109KKKPGVKDRRGCYKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076580.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076580.10.0probable WRKY transcription factor 70
TrEMBLA0A2G9I4Y94e-96A0A2G9I4Y9_9LAMI; Uncharacterized protein
STRINGMigut.F00572.1.p4e-88(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-30WRKY DNA-binding protein 70