PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076673.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 255aa    MW: 27920.5 Da    PI: 7.7684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.42.9e-1475120353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                     r+h+e+E+rRRdriN  +++Lr+l+Pk+     +K++Ka+ L ++v+++k+
  XP_011076673.1  75 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGQVVDHVKE 120
                     78*************************8.....8**************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-1371128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.59372121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-1275120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1475120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.93E-1175123No hitNo description
SMARTSM003536.5E-1278127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2607.1E-5159205No hitNo description
PROSITE profilePS516719.698159239IPR002912ACT domain
CDDcd048731.92E-7161228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MENCFWSEEY CASWNYGQAD VDKDGTLMVP WLPPAAADAA AAALQYHCSP PAGGVPPWTP  60
SFEGAAEDRT ASASRSHSEA EKRRRDRINA QLATLRKLIP KSEKMDKAAL LGQVVDHVKE  120
QSERAKEASK FSTIPTETDE VIIEHMNARE TAPQNIYVSA TVCCDDRPEL FAELNSALKS  180
LAVTIVKAEI TSLGGRTKSN FVLCAKDTGG AERNSCTSLL QQSLKLALSR VVISSGMSSY  240
SARSKRQRFF HPNPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076673.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076673.20.0transcription factor bHLH51
TrEMBLA0A2G9GF971e-109A0A2G9GF97_9LAMI; Uncharacterized protein
STRINGMigut.F00663.1.p6e-91(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58202235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-37bHLH family protein