PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076875.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 241aa    MW: 26526.9 Da    PI: 8.3989
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-1585133153
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                     +++ GVr++k +g++++eIrdp        kr++lg+f t+e+A +a+ a +k++
  XP_011076875.1  85 KKFVGVRRRK-SGKYASEIRDP-----IikKRVWLGTFATPEQASRAYLAKKKEI 133
                     589****999.7*********8.....336*********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.19E-1985126No hitNo description
SMARTSM003801.0E-1486150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-1786128IPR001471AP2/ERF domain
PROSITE profilePS5103215.06686144IPR001471AP2/ERF domain
PfamPF008471.9E-886134IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-1386133IPR016177DNA-binding domain
PRINTSPR003678.1E-68798IPR001471AP2/ERF domain
PRINTSPR003678.1E-6109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MNQKTMEKLT PTPTIKMVRI LYSDPDATES SSDEEVDTTQ KKGKKKKTLE IVLHAVNKSS  60
GSASEVSSEK KLVGSEKSPL PAVRKKFVGV RRRKSGKYAS EIRDPIIKKR VWLGTFATPE  120
QASRAYLAKK KEIDEKLKGK QGFDTVPTEK PSDKDSPFSV LENETSDLTN ETSQADAVKD  180
QEGLGENKVS ENQEAKFGFL NGVQVVDNNG FLVGEFSKID DLSLPSTEDG VFCPDMSFGA  240
K
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076875.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076875.21e-170ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G9GIW92e-68A0A2G9GIW9_9LAMI; Uncharacterized protein
STRINGMigut.E00336.1.p9e-54(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.11e-09ERF domain protein 11