PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011077170.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 760aa    MW: 84339.8 Da    PI: 6.7522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011077170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.86.9e-31288345260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +Dg+ WrKYGqK+vkgse+prsYY+Ct ++C+vkkkvers+ d++++ei+Y+g+Hnh+k
  XP_011077170.1 288 EDGFYWRKYGQKHVKGSEYPRSYYKCTNTNCQVKKKVERSH-DGQITEIVYKGSHNHPK 345
                     7****************************************.***************85 PP
2WRKY105.62.5e-33492550159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+a+d k v++tYeg+Hnhe
  XP_011077170.1 492 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCPVRKHVERAANDIKSVVTTYEGKHNHE 550
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.904282346IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-26283346IPR003657WRKY domain
SuperFamilySSF1182903.27E-24285346IPR003657WRKY domain
SMARTSM007744.2E-34287345IPR003657WRKY domain
PfamPF031063.5E-24288344IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.1E-36477552IPR003657WRKY domain
SuperFamilySSF1182902.48E-28485552IPR003657WRKY domain
PROSITE profilePS5081137.826487552IPR003657WRKY domain
SMARTSM007744.6E-38492551IPR003657WRKY domain
PfamPF031063.5E-25493550IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    Send to blast
MGANGGGPPP FVKKEDEFHD SNNCDDDNDD NHQILMREND HKNENKGISI AERRAAKCGF  60
NASNINAARF RTTGLATTPL RSPYFTVPPG LSPSALLDSP IMLPNAQAQL SPTTGTFHQF  120
PSPNHESLKL KLKLASSCSA SASASASPSA CGDDHNTFAP QSSSSKQPLS QYSSLLPNNT  180
SLLQNNKAFE EFEYPRDLQD TTSKNVDYFE DTLTETDQVV ILGNNNNQYL SSSLQPRNNH  240
QMFISSHNDH HHSSKDIRPT THPNQEKLHH HHQRGPYFPK DQVAKYSEDG FYWRKYGQKH  300
VKGSEYPRSY YKCTNTNCQV KKKVERSHDG QITEIVYKGS HNHPKPQPFK RLVSEMSSSD  360
MSPEGSSATS CFKTDGKDAA FASDWRPDHS LDGTSSTSFL SDFSDPLSRM NTIFESVETQ  420
EFSSAFASQD AEHDQTGASP ESISFNDEDD DQNGECEPKK RKRDNFPSET TTARSTREPR  480
VVVQIESDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTT PGCPVRKHVE RAANDIKSVV  540
TTYEGKHNHE VPCSKNGSLV ISDVANLPPS VTNSTIPTAA PLPQKPDHHH VPKAGKQVQD  600
LSSLYLERKP ILNYNELMRS NLPGNFTNDL NFGASSVYPL SFPPFHSLPN YSSLLMNGNQ  660
MKTNYPSSNL YPMLPDYMPL PSQVNHVAAA AAGSTNVPLA GNFHYSNYAA TSAVNQSSCR  720
GNEMRDCQQA KVVKPKEEQR DDGELYDTCL SIPNPGNGAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-35288552877Probable WRKY transcription factor 4
2lex_A1e-35288552877Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011077170.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0423425e-56KJ042342.1 Sesamum indicum clone TilSSR_13543 microsatellite Sesame_13543 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077170.10.0probable WRKY transcription factor 20
TrEMBLA0A2G9H5V30.0A0A2G9H5V3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.19e-76WRKY DNA-binding protein 2