PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011078203.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 543aa    MW: 60620.6 Da    PI: 7.9494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011078203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444.1e-14355400454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h + ErrRR+++N++f+ Lr+llP+       K +Ka++L  ++eYI+sL
  XP_011078203.1 355 HHMISERRRREKLNESFQVLRSLLPPG-----SKKDKASVLSSTTEYISSL 400
                     68899********************95.....599**************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.69E-13349405No hitNo description
PROSITE profilePS5088816.406351400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-18351419IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-11355400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-18355419IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-16357406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MSASLHSALS HLATLKLTEQ AFMDSIFLLG QAHRAAFLQH MTQSFGCSYI CLWSNLPLPS  60
NCLLFLDGIY QEESSQQPGP SSGSLVRRLF NAYCESVNYV DDQGRVPGFA FKNNIPYMEV  120
KLHGLERRLS SEMQMQFYQE AGIKTVVFMG CASGEIELGI SSEPRVDLEM ELKSWFPVDF  180
SRQKAPTELP QPTSQDRPST SSSLLRSLSV DSSEYSLLFN VQTSSFITKT PQAVPALIST  240
SPHHHSQAEN ALSQIRNIQF PTIESENAAM TKAILAVLSS PSTSSSSNTN LPPVSPAGDH  300
GPAAFRRYRS GLAPVAATSQ KHNMFKRSIS FFRNLNMRRR QEFLIQDRPT STQMHHMISE  360
RRRREKLNES FQVLRSLLPP GSKKDKASVL SSTTEYISSL KSQVEELSKR NQELQSELST  420
TARKEGGGEE VGWLSSSSET VSVEIAQVSS ASASTLEEAR FLDLRVRLRS GECSLLDLVI  480
RVLEFLNQHS NLRLLSVQSN TRLVESVPVH GLVLRLRVKG DEFEERGFQE AVRRVVDHLP  540
HSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1359364ERRRRE
2360365RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011078203.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078203.10.0putative transcription factor bHLH041 isoform X1
TrEMBLA0A022QLG21e-172A0A022QLG2_ERYGU; Uncharacterized protein
STRINGMigut.J00583.1.p1e-173(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-58bHLH family protein