PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011078371.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 164aa    MW: 18206.6 Da    PI: 7.3444
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011078371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.89.4e-121558350
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaar 50
                    + GV+++k +g+++A+I +p        kr +lg+f t+eeA+ka+   +
  XP_011078371.1 15 FIGVSRRK-SGKYAARITHP-----LmkKRLWLGSFSTPEEAYKAYLSKK 58
                    67***999.7*********7.....235******************7665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.1541454IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-131454IPR001471AP2/ERF domain
SMARTSM003807.5E-51460IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-111559IPR016177DNA-binding domain
CDDcd000182.34E-141554No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MESKKSQWAS ERREFIGVSR RKSGKYAARI THPLMKKRLW LGSFSTPEEA YKAYLSKKKS  60
SVQDSSSSDL SSETDHANAV KEESFGENNI PQLNQEVKFG VLNGVQIVDR NGFLIGEFSK  120
LDDLSICASK DGALLGCPDV GVSKLYELDQ TLINVWDLGP TLCI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011078371.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078371.11e-119ethylene-responsive transcription factor 10-like
TrEMBLA0A2G9GIW94e-33A0A2G9GIW9_9LAMI; Uncharacterized protein
STRINGMigut.E00336.1.p1e-24(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-11ERF family protein