PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011079549.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 254aa    MW: 28812.5 Da    PI: 4.7302
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011079549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.7e-3052110259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  XP_011079549.1  52 SDCWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDASMLIITYTSTHNHP 110
                     699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-3143112IPR003657WRKY domain
SuperFamilySSF1182901.12E-2548112IPR003657WRKY domain
SMARTSM007742.1E-3451111IPR003657WRKY domain
PROSITE profilePS5081130.82552112IPR003657WRKY domain
PfamPF031064.9E-2553110IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MQEIDQTELE SNLSSRTENH ASKKRKMGER VVVAVKIAEN DKKQQRNEGP PSDCWSWRKY  60
GQKPIKGSPY PRGYYRCSTS KGCSAKKQVE RCKTDASMLI ITYTSTHNHP GPDFSLPTNQ  120
KQEEKETDSA PESTDTQPTT PKQEQEAELM PQETPVSNSE HQFQYSQSPF NSTTTDHIIV  180
NQENPFQENL ETHGGVYSED PKSVVSHDAV ELSSLLKPEE NDFYDELEEL PSSSFFTAFM  240
RSSFCEETIT VNPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21521121779Disease resistance protein RRS1
5w3x_D1e-21521121779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011079549.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231718e-74KM823171.1 Salvia miltiorrhiza WRKY protein (WRKY48) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079549.10.0probable WRKY transcription factor 35
TrEMBLA0A022S2171e-110A0A022S217_ERYGU; Uncharacterized protein
STRINGMigut.D00078.1.p1e-111(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-37WRKY DNA-binding protein 35