PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011079715.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HB-other
Protein Properties Length: 1017aa    MW: 113342 Da    PI: 7.9401
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011079715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox20.29.8e-0768124157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +r+R  ++++ ++ ++ +F  +  +s++e +e++++ g+t +qV+ +F  rR++ +k
  XP_011079715.1  68 KRPRDLLNPKAVKYMQLVFSIKDVVSKRETREISAQFGVTVTQVRDFFTGRRTRVRK 124
                     799***************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.8865125IPR001356Homeobox domain
SMARTSM003897.6E-467129IPR001356Homeobox domain
SuperFamilySSF466897.7E-768130IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-668135IPR009057Homeodomain-like
CDDcd000862.05E-468124No hitNo description
Gene3DG3DSA:1.20.930.101.1E-7223315IPR017923Transcription factor IIS, N-terminal
SuperFamilySSF476762.35E-7224315IPR017923Transcription factor IIS, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009911Biological Processpositive regulation of flower development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1017 aa     Download sequence    Send to blast
MEFPKETQLM ELAAPRTSYQ DLLDAQRDLF QNQIEKLQQI VATQCKLTGV NPLSQEMAAG  60
ALSIKIGKRP RDLLNPKAVK YMQLVFSIKD VVSKRETREI SAQFGVTVTQ VRDFFTGRRT  120
RVRKCVRLSK EKANRSSAHD ALHNETTSAS DPNMLSEAVP IDTIAPVNID EGPSCSKRHE  180
SFTGMDESDL HFVENIFSLM RKEDSFSGQV KLLRWILRVE NPSVLNWFLT EGGLMILATW  240
LSEAAKEEQT SFLRVILKLL DNLPLRKALP VHMSAILQSV NRLRFYRTSD ISHRARTMLS  300
KWSNMLGKNL SLKKSNGLKS ASDLQDEMLL KQSINEVMGN ESWDSKVDNS EEPLRFLCDS  360
ADNHWKLDAA QPQKMLTASG DDSNKRRGVL SSHTRERRKV QMVEYPSQRL AVRSPQVAKS  420
TPATQSRPLS ADDIQKAKMR AQFMQNKHGK TSTCPDEKVK PESQNRCTSS HANFPPSASK  480
SNLQSEPEEQ RKLDSAVSKS NVQSEPEEQR KLDNAISKLA NQQAISPLEL EEPPCKKNKR  540
VQIPWRTPPE IRIREAWHVG DGANSKEVEV QKNRIRRERE IVYREAQEIP SDPREPWDRE  600
MDYDDTLTPE IPIEQLPDVE PIDTPVSSSD TKEIVASVAS ASSESMPEPD LELLAELLKN  660
PDLVFALASG QGGDLSSAAT VKLLDMIKAN GVSSLGNLSG NTTVEVSLPS PTPSSDPVPN  720
GLKPDFSRNP FSRQHAFENG NAYQAPGASL PLQSHGMIPT SILPQHQIPA TTILAPQPSA  780
AVQQLAHMVG PPVSSLPIQL PEQWQGPANP QIHHQNTHPI TSNIHLTTEM RLNANTLADS  840
NRASSNVLGA SSPTIRAEPF GNVNPSPGSV LMAPSQSLAP SHPLNPQLSY IQEPLVSNSL  900
RSRQGFDSNY HYQNNQTVNN YNAYAGGAGQ AVLPPAGNWG GRNNLADRPE FESWSPDNSP  960
SRRHEYLPGR YYHEASPNLR HGYRPERSMQ KSLGESSSYQ EYNMSRTGSQ RWPDHRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRTRVRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011079715.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079715.10.0homeobox protein LUMINIDEPENDENS
TrEMBLA0A2G9GAN80.0A0A2G9GAN8_9LAMI; Uncharacterized protein
STRINGMigut.D00183.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52402123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.21e-171HB-other family protein