PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080686.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 340aa    MW: 37256.2 Da    PI: 7.7069
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.000192142521255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_011080686.1 214 RKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 252
                     6678889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.846202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.68E-11212264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.63E-6212256No hitNo description
Gene3DG3DSA:4.10.280.104.6E-8216259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MMAGNPNWWS MNSMHPQLSS QFLYPTSTSS LSSNTTAPDN PTQDFPVRSW SQLLLGGEEE  60
RYGGSLFQQQ KKLENWEDQV LNLNPSFTRV PVLDVKQEIP QSTTQLYNDH DEFQANHIHR  120
LSNSWPPYHQ LMPVSNSSPT SCITTLSSSN NNNNNNILNF SGGKGATAVA AQRKNVHQAH  180
NQDHSSECNS ASTGGVSKKP RVQQSSAQPA LKVRKEKLGD RITALHQLVS PFGKTDTASV  240
LSEAIGYIRF LQAQIEALSS PYMRNGSGSS TIHHQHSFLN DQMGMEGRGP SKQDSQSSRG  300
VKDLRSRGLC LVPISCTQNV ENDGVATDYW APAAALGGGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011080686.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0360046e-60KJ036004.1 Sesamum indicum clone TilSSR_7205 microsatellite sesame_7205 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080686.10.0transcription factor bHLH68
TrEMBLA0A2G9H4141e-150A0A2G9H414_9LAMI; Uncharacterized protein
STRINGMigut.I00932.1.p1e-114(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15192247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-50bHLH family protein