PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081304.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 254aa    MW: 28282.9 Da    PI: 5.9523
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19127177255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp  +g   r++lg+f+ta eAaka+++a+ k++g
  XP_011081304.1 127 RYRGVRRRP-WGKYAAEIRDPARRG--SRVWLGTFDTAVEAAKAYDRAAFKMRG 177
                     7********.**********95443..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.86E-23127187IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.7E-32127186IPR001471AP2/ERF domain
PfamPF008471.8E-13127177IPR001471AP2/ERF domain
PROSITE profilePS5103224.632127185IPR001471AP2/ERF domain
SMARTSM003804.9E-38127191IPR001471AP2/ERF domain
PRINTSPR003671.1E-10128139IPR001471AP2/ERF domain
CDDcd000183.21E-24135185No hitNo description
PRINTSPR003671.1E-10151167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MANPDEVSAI ERIRMHLLGE FSPCQHDDNG ASTSNSFTSS VASSESDSLC SQVSTCDSGL  60
SSISDYFLDF EQNQLCSAPV VDLMKTKAKP ELRVEIPTAA VRKFEWIEFG GSGQQNSVEE  120
EEEEKRRYRG VRRRPWGKYA AEIRDPARRG SRVWLGTFDT AVEAAKAYDR AAFKMRGSKA  180
ILNFPLEVQR EECASQAAAY GGGKRRRKEE AIEGSQLKTV KCEMVVKSEM TERAPLTPSF  240
WALSPLLSPQ LLVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-29126192470ATERF1
3gcc_A1e-29126192470ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081304.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0410822e-47KJ041082.1 Sesamum indicum clone TilSSR_12283 microsatellite Sesame_12283 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081304.10.0ethylene-responsive transcription factor 5-like
TrEMBLA0A022PYF62e-87A0A022PYF6_ERYGU; Uncharacterized protein
STRINGMigut.A01161.1.p3e-88(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-34ethylene responsive element binding factor 5