PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081629.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Nin-like
Protein Properties Length: 344aa    MW: 39374.2 Da    PI: 6.0894
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.16.3e-22253302352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +++l dl+ yF+lpi +A+k++++c++++K iCR+ G+ RWP+Rkiks+
  XP_011081629.1 253 GKMKLRDLAGYFHLPISKASKKMNICPSAIKSICRKEGLLRWPYRKIKSI 302
                     68999*******************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.21242322IPR003035RWP-RK domain
PfamPF020423.6E-19255302IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MADQNANVPH NQELMDAISS AEQLLMFDEN QDDDPLFHSF VDEMVQEPAL NVLGNYGTTD  60
LTGNPLEENT FDQNRNSNDF PQNPAFGNLI RIPIWPVPPS PHTCTCCQTL REIFHVNGNH  120
VLKLDVHGRL GLISHAVLER YNTDTSSQTD HEYHMFDFCQ ESISSVKQFL VQYCDDRKRE  180
GYVMLQDPLS HFYNTLCIGL DSNGRADANI FLHQTSRGNR QMNQEDDMNQ PEEEGNEVRL  240
SKSYIASQRE RTGKMKLRDL AGYFHLPISK ASKKMNICPS AIKSICRKEG LLRWPYRKIK  300
SIEGKIAKKK KSLNSNDADE RARALAEIQE LQRKLANLCD VNVW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081629.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081629.10.0uncharacterized protein LOC105164634 isoform X1
TrEMBLA0A4D9AEB01e-106A0A4D9AEB0_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35052027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-07Nin-like family protein