PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081630.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Nin-like
Protein Properties Length: 339aa    MW: 38666.4 Da    PI: 6.1333
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.16.1e-22248297352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +++l dl+ yF+lpi +A+k++++c++++K iCR+ G+ RWP+Rkiks+
  XP_011081630.1 248 GKMKLRDLAGYFHLPISKASKKMNICPSAIKSICRKEGLLRWPYRKIKSI 297
                     68999*******************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.21237317IPR003035RWP-RK domain
PfamPF020423.5E-19250297IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MADQNANVPH NQELMDAISS AEQLLMFDEN QDDDPLFHSF VDEMVQEPAL NVLGNYGTTD  60
LTGNPLEENT FDQNRNSNDF PQNPAFGNLI RIPIWPVPPS PHTCTCCQTL REIFHVNGNH  120
VLKLDVHGRL GLISHAVLER YNTDTSSQTD HDFCQESISS VKQFLVQYCD DRKREGYVML  180
QDPLSHFYNT LCIGLDSNGR ADANIFLHQT SRGNRQMNQE DDMNQPEEEG NEVRLSKSYI  240
ASQRERTGKM KLRDLAGYFH LPISKASKKM NICPSAIKSI CRKEGLLRWP YRKIKSIEGK  300
IAKKKKSLNS NDADERARAL AEIQELQRKL ANLCDVNVW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081630.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081630.10.0uncharacterized protein LOC105164634 isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-07Nin-like family protein