PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081639.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 160aa    MW: 18488.5 Da    PI: 8.0959
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-3096154159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYG+K+vk+s++pr+YY+C+ agC+vkk+ver++ed+++v++tY+g Hnh+
  XP_011081639.1  96 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVAGCSVKKRVERDKEDQRYVVTTYQGVHNHQ 154
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-3282156IPR003657WRKY domain
SuperFamilySSF1182901.05E-2789156IPR003657WRKY domain
PROSITE profilePS5081130.67691156IPR003657WRKY domain
SMARTSM007741.5E-3396155IPR003657WRKY domain
PfamPF031064.1E-2397154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MAHTTNIPGP SFSPYHQTTN FQVSDDFFEY WTTNDVEDVF PAFSSLSAGY NYSQLLNHTP  60
KPNDMPAVNN NCSHEGVINR DREKVAFITK SEVEILDDGF KWRKYGKKMV KNSPNPRNYY  120
KCSVAGCSVK KRVERDKEDQ RYVVTTYQGV HNHQPPNHHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-25891561077Probable WRKY transcription factor 4
2lex_A3e-25891561077Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081639.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081639.11e-119probable WRKY transcription factor 50 isoform X1
TrEMBLA0A2G9HW233e-55A0A2G9HW23_9LAMI; Uncharacterized protein
STRINGMigut.E01579.1.p2e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.14e-39WRKY DNA-binding protein 50