PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081953.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 229aa    MW: 24983.9 Da    PI: 4.4547
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-182574255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  XP_011081953.1 25 KYKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 74
                    8*****999.**********933...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-292583IPR001471AP2/ERF domain
PROSITE profilePS5103221.5222582IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-202583IPR016177DNA-binding domain
SMARTSM003808.1E-332588IPR001471AP2/ERF domain
PfamPF008471.4E-102574IPR001471AP2/ERF domain
CDDcd000188.52E-292584No hitNo description
PRINTSPR003672.2E-92637IPR001471AP2/ERF domain
PRINTSPR003672.2E-94864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MVKTPSAAAA AAAASSEPSV NNELKYKGVR KRKWGKYVSE IRLPNSRERI WLGSYDTAEK  60
AARAFDAALF CLRGPNAKFN FPDDPPNISG GQALNPAEIQ TVAHHYANTY NYSGSSSSSN  120
NNQPHSQAPN VDQFGAPAMD EDTSPSSTHS EGAGPMDLID WSAWDMWDSS SGGNAAGDHV  180
LDYVLFHEPS YMYMPPHFTE KGNDQDEDND DDNDHGNGGN VFSSDLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1625841474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KGVRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081953.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081953.21e-170ethylene-responsive transcription factor ERF018-like
TrEMBLA0A4D8Z4X17e-75A0A4D8Z4X1_SALSN; EREBP-like factor
STRINGMigut.A00330.1.p4e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-44ERF family protein