PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082058.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB_related
Protein Properties Length: 611aa    MW: 65432.7 Da    PI: 6.0546
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-09206232329
                      SS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIar 29 
                       W+teEd +l  av+++G ++W+ Iar
   XP_011082058.1 206 GWSTEEDMKLTAAVEKYGERNWANIAR 232
                      6*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.768199256IPR017930Myb domain
SuperFamilySSF466892.73E-12200254IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-12200255IPR009057Homeodomain-like
SMARTSM007173.3E-9203254IPR001005SANT/Myb domain
PfamPF002491.3E-6206232IPR001005SANT/Myb domain
CDDcd116608.04E-10207253No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MVDKSRKRKK GSISEEDVST LLQRYSVNTV LALLQEVGQV AGENIDWHEM VKNTATGISG  60
AREYQMLWRH LAYGETLIDQ FDHDADLMDD DSDLEYELEA FPAVGREASA EAAACVKVLI  120
ASGYPNDTQL PNNSTIEAPL TINIPSSKAL TNPSDSSLLA NAMHGTNISI PVSVQKQPLS  180
SGICGEKRPN NGTSGLNMPP RRKRRGWSTE EDMKLTAAVE KYGERNWANI ARGDFKNDRK  240
ASELSQRWAN LRKKQGNLKV GTSSQLSETQ LAAAHRAMSL ALNMPMGDNL KGASQISTVG  300
MKSQQQSQKA STSPTDQQLG RAGPPKSQVP TKRPTMNPNS TPDSMVKAAA VAAGARIATS  360
ADASSLIEAA RSQNVVHITT GGSSVMKSST TSITNQLPSN VHFIRNGLAK APISTYSAAK  420
PNISRPGEAQ QAQGHLIKPA ASAVQSKPVV TATMLNVTSR VENGTASTTS ITLPKTSEGA  480
VVSASATEKQ ELLQRDQDTD QDAICCCDPE ERLPVNQSAA PGNQSEVGKS QSSASCNAPE  540
ENTREDQTSI SLSDLVGQRQ DDQVALPLPE AEGNGTKNTE NQFANKEIHD NPVPSERHED  600
LPSVDESEKS K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
159RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082058.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082058.10.0uncharacterized protein LOC105164926
TrEMBLA0A2G9HEQ90.0A0A2G9HEQ9_9LAMI; Uncharacterized protein
STRINGMigut.A00432.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58220.12e-60MYB_related family protein