PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082616.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 336aa    MW: 37725.8 Da    PI: 10.1891
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.35.5e-32270327359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  XP_011082616.1 270 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 327
                     9************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.2E-18221266IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.9E-34256328IPR003657WRKY domain
PROSITE profilePS5081130.458263329IPR003657WRKY domain
SuperFamilySSF1182901.44E-27266328IPR003657WRKY domain
SMARTSM007741.3E-39268328IPR003657WRKY domain
PfamPF031069.3E-28270327IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEDVEKANSS AVESCHRVIS ILSQLQDQNQ CRNLLVEQTG EAVHKFKKVV SLLNSSCGHA  60
RVRKSKKIQT PLPQNIFLEN PILPADDRQS KSLHLPHQEI VPLVKNTLTL GSPSLELSSN  120
GKSLQLAQQN YNFLQQQHQQ RLHLQQQHQQ QLKQQAELMY RRSNSGISLN FDSSTCTPTM  180
SSTRSFISSL SIDGSVANFD GSAFRLLGPS RSADQSSYHH KRRCLGRGED GSVKCGGSGR  240
CHCSKKRKHR VKRSIKVPAI SNKLADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSSMRGC  300
PARKHVERCL EDPSMLIVTY EGEHNHPRLP SQSANT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20261330775WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082616.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082616.10.0probable WRKY transcription factor 21
SwissprotO043361e-120WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2G9HEN80.0A0A2G9HEN8_9LAMI; Uncharacterized protein
STRINGXP_009618397.11e-172(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32712350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.14e-96WRKY DNA-binding protein 39