PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082648.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 156aa    MW: 17788.4 Da    PI: 10.0986
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.4e-212576156
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g+
  XP_011082648.1 25 PQFRGVRKRP-WGRYAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARNLRGA 76
                    689*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.46E-282582No hitNo description
PfamPF008471.6E-132575IPR001471AP2/ERF domain
SMARTSM003801.4E-322689IPR001471AP2/ERF domain
PROSITE profilePS5103221.6142683IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-212683IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-302683IPR001471AP2/ERF domain
PRINTSPR003673.7E-102738IPR001471AP2/ERF domain
PRINTSPR003673.7E-104965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MVVEKPENDA VGGRPQQPFY VKKGPQFRGV RKRPWGRYAA EIRDPWKKTR KWLGTFDTAE  60
EAALAYDEAA RNLRGAKAKT NFMYVGGDAA PPAMNVNAAY WRQPEFLRPV GEAKASEYKG  120
YKMEEVGAVV MNEQEKQMRS EKKPFLFDLN LPAPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-202382262ATERF1
3gcc_A3e-202382262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082648.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082648.11e-110ethylene-responsive transcription factor 14
TrEMBLA0A2G9HEF41e-82A0A2G9HEF4_9LAMI; Uncharacterized protein
STRINGMigut.N02188.1.p6e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-22erf domain protein 9