PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083617.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TALE
Protein Properties Length: 453aa    MW: 50457.5 Da    PI: 6.5133
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.61.2e-093784151954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  XP_011083617.1 378 FEHflHPYPNDSEKLMLASQTGLSKNQVSNWFINARVR 415
                     664459******************************88 PP
2BELL91.86.8e-30247311872
            BELL   8 kkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                        kLl lleeV++rY+ y++ ++ ++ssFe++aglg+ k+Yt+lAl+a+S+hF +L++ai++qi
  XP_011083617.1 247 NLIKLLALLEEVERRYEEYYHHMEELVSSFEVIAGLGAGKSYTALALQAMSKHFCSLRNAIVSQI 311
                     567*************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.3E-28172309IPR006563POX domain
PfamPF075264.0E-36178308IPR006563POX domain
PROSITE profilePS5007111.969356419IPR001356Homeobox domain
SMARTSM003891.8E-9359423IPR001356Homeobox domain
CDDcd000862.35E-11359420No hitNo description
Gene3DG3DSA:1.10.10.603.2E-27364425IPR009057Homeodomain-like
SuperFamilySSF466891.63E-17365426IPR009057Homeodomain-like
PfamPF059203.1E-17376415IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MVSEDSPSNS NSSILHQFII STSIANQNHF GNQHFDAYGA TDSVSNSPYP HSLPLSIQFL  60
GDRISRSVDL VHHAPHLSDD SDIGHDRRLM DLLGRSTEAA QPAQRLSLSL GSVPCRQRPL  120
NSSLLNPSYL SSGDAARESC NLGIDRVIND YSFTGTAFAS LNQSCSTSYG TESFAAAIGS  180
SKYLKPAQSI LEEMVSVGGK DTDISNQRYV EKLSRGSRKG SHGLSSELKA ELSNGELLPE  240
KHGNYTNLIK LLALLEEVER RYEEYYHHME ELVSSFEVIA GLGAGKSYTA LALQAMSKHF  300
CSLRNAIVSQ IRATKQKIEK EMPKISSRLS QLSLFDQEAR QNRISLQQLG LMHNSRQAWR  360
PIRGLPETSV TILRAWLFEH FLHPYPNDSE KLMLASQTGL SKNQVSNWFI NARVRLWKPM  420
IEEMYKEEFA DSSTESDQLL TREGVGDSAE ELN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A6e-17365422158Homeobox protein Meis1
4xrs_B6e-17365422158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083617.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083617.10.0BEL1-like homeodomain protein 11
SwissprotQ1PFD19e-98BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A2G9HZS40.0A0A2G9HZS4_9LAMI; Transcription factor MEIS1
STRINGVIT_18s0001g13130.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86022228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.14e-87BEL1-like homeodomain 11