PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083625.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 433aa    MW: 47068.4 Da    PI: 8.6651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.1e-053233611255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_011083625.1 323 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 361
                     7788899*********998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.312311360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.35E-5321365No hitNo description
SuperFamilySSF474599.03E-11321373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-9325368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MESANSHHHH HHHHLQDHQF LGSSSSSSPS CYAVGTTTTH PWTTPNSLLN TNGLMSSYPS  60
ENLSNSREPR HQEATFLSSQ YTSMAPADLG FHWANTTANF TTLSHQSAQD LRIKEDLADH  120
YYRKYTEILS SSCSPSSTDE LSLQRNAQRS LQPNGIDTKL FLKSVSSGNL MNKAQLSQGD  180
LYSSNVTGAA AVNGRGFSQI LPSINISNLN QTGLTNPASS LDMNLEALDL LTSSRFGGSY  240
DPSSQNQIGL LRDGFSYGFD HMQQSHQIPL LYSSNNKVST PANLGAAEAK RSSSKTEPKA  300
PLQSAPKKSR LEARASCPPF KVRKEKLGDR IAALQQLVAP FGKTDTASVL MEAIGYIKFL  360
QNQVETLSVP YMKASRNKSS RAMKGGPTDN EHEEPKRDLK SRGLCLVPLS CLSYITDGGG  420
AAVWPPPHFG GAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083625.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0433992e-75KJ043399.1 Sesamum indicum clone TilSSR_14600 microsatellite Sesame_14600 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083625.10.0transcription factor bHLH110 isoform X1
TrEMBLA0A2G9HVM51e-161A0A2G9HVM5_9LAMI; Uncharacterized protein
STRINGVIT_18s0001g12970.t011e-134(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75332227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-63bHLH family protein