PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083976.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 507aa    MW: 55875.8 Da    PI: 6.125
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.82.5e-24200255359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     DgynWrKYGqK+vk+ e +rsYYrCt+++C +kk +e++++ ++v+e++Y+++Hnh+
  XP_011083976.1 200 DGYNWRKYGQKQVKSPEGSRSYYRCTFSDCYAKK-IECCDRSNRVIETVYRSHHNHD 255
                     9*******************************98.*********************7 PP
2WRKY98.25.2e-31373429359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ ++ ++v+itY+g H+h+
  XP_011083976.1 373 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNVSAVVITYKGVHDHD 429
                     9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182905.1E-20194257IPR003657WRKY domain
SMARTSM007742.4E-22198256IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-20198257IPR003657WRKY domain
PROSITE profilePS5081118.59200257IPR003657WRKY domain
PfamPF031063.5E-17200255IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-31356431IPR003657WRKY domain
PROSITE profilePS5081132.535366431IPR003657WRKY domain
SuperFamilySSF1182903.01E-27367431IPR003657WRKY domain
SMARTSM007741.5E-35371430IPR003657WRKY domain
PfamPF031061.0E-23373428IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MGEENNRSSV ENMEAGNSPP EEEEEGGDNQ GEEFEKNDEQ RRVGEDNNSD CVAGGASAGD  60
GRESRASQSD TLTSVQVSES GFQPDSKESP ELLSEVPVEY SLQPLQSVEE LKDQVREVEK  120
EPLKRITGQS AQVKIQISET PSNLKLLPMS VKQSISPTTL SDKKAQPVDN GNSPCLTEHD  180
KLKSPGSKPV SVVPMLKTPD GYNWRKYGQK QVKSPEGSRS YYRCTFSDCY AKKIECCDRS  240
NRVIETVYRS HHNHDPPQKG NCARETRHAL AIVPFNGSDD TTHPVRGVND PVPSTSSKEP  300
LEVIDQIPEI KQQDSCGSDE TIEVNIKGEY VDGPEYKRRQ KRSSLGELSS ISKTGKKPKY  360
VVHAAGDVGI SGDGYRWRKY GQKMVKGNPH PRNYYRCTSA GCPVRKHIER AVDNVSAVVI  420
TYKGVHDHDM PVPRKRHGPK SDPPVASTTP VSVDNSQTTK TESCQSQTQW SVDKEGELTC  480
EALNPGGEKT SESARTLLSI GFEIKPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-25361431474WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083976.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083976.10.0probable WRKY transcription factor 32 isoform X1
SwissprotP595831e-107WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A2G9G6X60.0A0A2G9G6X6_9LAMI; Uncharacterized protein
STRINGMigut.J01340.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-109WRKY DNA-binding protein 32