PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085118.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 299aa    MW: 33765.1 Da    PI: 8.201
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.62.8e-24116176159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK++ +s++pr Y+rCt++  gC+++k+v+r +e+p + +itY ++H+++
  XP_011085118.1 116 VEDGYAWRKYGQKDILDSQYPRCYFRCTHKyeGCKATKQVQRIKEEPILYQITYFNHHTCT 176
                     58***************************999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-23107176IPR003657WRKY domain
PROSITE profilePS5081118.475111173IPR003657WRKY domain
SuperFamilySSF1182901.57E-22114176IPR003657WRKY domain
SMARTSM007742.2E-33116177IPR003657WRKY domain
PfamPF031063.6E-23117175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MKTGSSLHAK RKRVIVELVK GKETATRLRT LLRIPDQDHG SSSVTPGHLA FQILRSFNKT  60
LSVLTSSCAA TSPAAVDCRG SACSGESKQK PGLKSRRGCY KRRRSCESWT KICSVVEDGY  120
AWRKYGQKDI LDSQYPRCYF RCTHKYEGCK ATKQVQRIKE EPILYQITYF NHHTCTETAR  180
ALPLIPDPDP VNPNLLSFQT GNPSKQEECH STNSEIKKEE CSKQNEGEGV CDDAISYLLD  240
PWQEMIGSDP FGYKPIWGPT MSFHQEDGGS GLYSCGSTSL HELHMEVNQF GYIDNYFYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-18116175868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085118.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085118.20.0LOW QUALITY PROTEIN: probable WRKY transcription factor 70
TrEMBLA0A2G9I4Y97e-95A0A2G9I4Y9_9LAMI; Uncharacterized protein
STRINGMigut.F00572.1.p1e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-41WRKY DNA-binding protein 70